SELECT 
  cscart_products_categories.product_id, 
  GROUP_CONCAT(
    IF(
      cscart_products_categories.link_type = "M", 
      CONCAT(
        cscart_products_categories.category_id, 
        "M"
      ), 
      cscart_products_categories.category_id
    )
  ) AS category_ids 
FROM 
  cscart_products_categories 
  INNER JOIN cscart_categories ON cscart_categories.category_id = cscart_products_categories.category_id 
  AND cscart_categories.storefront_id IN (0, 1) 
  AND (
    cscart_categories.usergroup_ids = '' 
    OR FIND_IN_SET(
      0, cscart_categories.usergroup_ids
    ) 
    OR FIND_IN_SET(
      1, cscart_categories.usergroup_ids
    )
  ) 
  AND cscart_categories.status IN ('A', 'H') 
WHERE 
  cscart_products_categories.product_id IN (
    40617, 40645, 40646, 54711, 40650, 40647, 
    40675, 40684, 40668, 40614
  ) 
GROUP BY 
  cscart_products_categories.product_id

Query time 0.00094

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "17.71"
    },
    "grouping_operation": {
      "using_filesort": false,
      "nested_loop": [
        {
          "table": {
            "table_name": "cscart_products_categories",
            "access_type": "range",
            "possible_keys": [
              "PRIMARY",
              "pt"
            ],
            "key": "pt",
            "used_key_parts": [
              "product_id"
            ],
            "key_length": "3",
            "rows_examined_per_scan": 19,
            "rows_produced_per_join": 19,
            "filtered": "100.00",
            "index_condition": "(`cscartdb`.`cscart_products_categories`.`product_id` in (40617,40645,40646,54711,40650,40647,40675,40684,40668,40614))",
            "cost_info": {
              "read_cost": "9.16",
              "eval_cost": "1.90",
              "prefix_cost": "11.06",
              "data_read_per_join": "304"
            },
            "used_columns": [
              "product_id",
              "category_id",
              "link_type"
            ]
          }
        },
        {
          "table": {
            "table_name": "cscart_categories",
            "access_type": "eq_ref",
            "possible_keys": [
              "PRIMARY",
              "c_status",
              "p_category_id"
            ],
            "key": "PRIMARY",
            "used_key_parts": [
              "category_id"
            ],
            "key_length": "3",
            "ref": [
              "cscartdb.cscart_products_categories.category_id"
            ],
            "rows_examined_per_scan": 1,
            "rows_produced_per_join": 0,
            "filtered": "5.00",
            "cost_info": {
              "read_cost": "4.75",
              "eval_cost": "0.10",
              "prefix_cost": "17.71",
              "data_read_per_join": "3K"
            },
            "used_columns": [
              "category_id",
              "storefront_id",
              "usergroup_ids",
              "status"
            ],
            "attached_condition": "((`cscartdb`.`cscart_categories`.`storefront_id` in (0,1)) and ((`cscartdb`.`cscart_categories`.`usergroup_ids` = '') or (0 <> find_in_set(0,`cscartdb`.`cscart_categories`.`usergroup_ids`)) or (0 <> find_in_set(1,`cscartdb`.`cscart_categories`.`usergroup_ids`))) and (`cscartdb`.`cscart_categories`.`status` in ('A','H')))"
          }
        }
      ]
    }
  }
}

Result

product_id category_ids
40614 1194,39M
40617 1195,93M
40645 1212,63M
40646 1213,39M
40647 1232,39M
40650 1209,61M
40668 1232,39M
40675 1233,39M
40684 1230,39M
54711 1228,349M